Protein ZmOFP28 | |
---|---|
Information | |
TF Name: | ZmOFP28 |
Species: | Maize |
TF Family: | OVATE |
Gene Name(Synonym): | OFP28 |
Uniprot ID: | B4FIR1 |
Subgenome: | 1 |
ZmOFP28 is a protein in the OVATE family.
Overview of domains present in v5 transcripts | ||
---|---|---|
PF04844 | PF13724 | |
Zm00001eb290570_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d038473 | DAPseq | sequence | fimo | position | |
Zm00001d038473 | DAPseq | sequence | fimo | position | |
Zm00001d038473 | ChIPseq | sequence | fimo | position | |
Zm00001d038473 | PChIPseq | sequence | fimo | position |
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF13724 |
|
PF13724 |
|
PF13724 |
|
PF04844 |
|
Hover here to show all domains |
CGCGCTGCCCCGCGCCGCGCTACTT...
CGCGCTGCCCCGCGCCGCGCTACTTATCAGTTATCCCGGCATCTCCTCACTTGGTCCCCGGCCACCACACCACCTCTCCAGCCGCCCTCCTCGTACGCGCGGCGCAGAGGTCCTTCTTCGCCAGCGCCTCGGGGCCATGGGGCGCCGTAGGTTCCGGCTCGCCGACATGATGCCCAACTCCTGGTTCTACAAGCTCCGCGACATGCGCCGCCCACGGGGTCACCCTCCTGCCGTTGGCGGCTCCGGGGCCGCGAGCGCAATGCTGCAGTCGTCGGCGGCGCCGCCGCAGAGGGGGGCAAGGTCTGCCACGAGGCCTGGGTCCCCGAGGCACGGGTCCGTGGCGCTCCCGCACAGGACCTCGTACTACTACCCCACCCGGGACCGGGAGCTCCCGGCGCCGGAGCCGAGGGGCGCCAAGGATGAGAACCGGCAGGTCCTCCCCCAGCAGCTGTCGGCGACAGGTTACTCCAGGAGGCGGCACGGGGTTGCGCGCGGGCTGGAGGCTCCGGCCGGAGCGCACGACGCTTCCAGGAGCAGGCGGGACATGTACGTCGGGGTCGGGCGCGACGGCAGCGACGAGGAGGACGTCGACGAGGTCCGGAGGCCGGGGGTGATTGCGCCATCGGAGTATAGCGTGAGCGGTAAGGTGATCGCGTCAGAAACGGACATCGTCATCGACCTCTGCTCCGAGGGCACCGCCGAGCGGGTGCTCCGCCCTATCGTGACGAGGCCCGCGATGAGGGAGGTGGTCCGGTACGAGCCGAAGGACAGGCACGTCGACGTCGCCGACACGTCGCCGACACGCGCCAGCTCTGCCTCGGAGCAGGGAAGCAAGGGCCACCCGAGGCGGTCGTCCGTGTCCGTGGGGCGCCGCCTCAGGACGCGCGTCAGCAGCCCGCGGCTGGCGTCCGCCAGGTCGAGGAAGAACAGCAAGCCGACAAGCGCGGGGGCGTCGCCACGGAAGACGAGGCCAGCACCGCCGCCGCCTCTCGCGGAGAGCTTCGCGGTGGTGAAGTCGTCGGCCGACCCCAGGCGGGACTTCCGCGAGTCGATGGAGGAGATGATCGCGGAGAAGGGCATCCGCGGCGCCGCCGACCTGGAGGACCTCCTGGCCTGCTACCTCGCCCTCAACGCCGACGAGCACCACGACCTCATCGTGGAGGTGTTCGAGGAGATCTGGGCCAGCCTCGCCAGCGCTAAACCCATGAAAGGAAACAGAAACGACGGCCGCGAATGAGCTGAGGTCATCGTTCGTCGTCCTCCCCTCTCCCGCTGCACGCCTGCATGCTCGATGATCAGTGCATTCATTTCTAGCAGCGGATTAAACTAGCTTTAGCCTTTTAGTCCCTTGACTTGTTATTGATGGATGATTGCAATAACAAAACTCCGCAAGGGAACTCGAGAAAGGGAAAAAAAAAAGAAAGAAAGACATTCCGGCTCGATCTGCGAAAGTTTTTGGTTCTTTGCTTGCTCGGTGATCGTGTGATTCTTCTCCCTGGGATCGCGTGCG
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
CCCACGCTTCTCATCCCCGCTCGCG...
CCCACGCTTCTCATCCCCGCTCGCGCGCTGCCCCGCGCCGCGCTACTTATCAGTTATCCCGGCATCTCCTCACTTGGTCCCCGGCCACCACACCACCTCTCCAGCCGCCCTCCTCGTACGCGCGGCGCAGAGGTCCTTCTTCGCCAGCGCCTCGGGGCCATGGGGCGCCGTAGGTTCCGGCTCGCCGACATGATGCCCAACTCCTGGTTCTACAAGCTCCGCGACATGCGCCGCCCACGGGGTCACCCTCCTGCCGTTGGCGGCTCCGGGGCCGCGAGCGCAATGCTGCAGTCGTCGGCGGCGCCGCCGCAGAGGGGGGCAAGGTCTGCCACGAGGCCTGGGTCCCCGAGGCACGGGTCCGTGGCGCTCCCGCACAGGACCTCGTACTACTACCCCACCCGGGACCGGGAGCTCCCGGCGCCGGAGCCGAGGGGCGCCAAGGATGAGAACCGGCAGGTCCTCCCCCAGCAGCTGTCGGCGACAGGTTACTCCAGGAGGCGGCACGGGGTTGCGCGCGGGCTGGAGGCTCCGGCCGGAGCGCACGACGCTTCCAGGAGCAGGCGGGACATGTACGTCGGGGTCGGGCGCGACGGCAGCGACGAGGAGGACGTCGACGAGGTCCGGAGGCCGGGGGTGATTGCGCCATCGGAGTATAGCGTGAGCGGTAAGGTGATCGCGTCAGAAACGGACATCGTCATCGACCTCTGCTCCGAGGGCACCGCCGAGCGGGTGCTCCGCCCTATCGTGACGAGGCCCGCGATGAGGGAGGTGGTCCGGTACGAGCCGAAGGACAGGCACGTCGACGTCGCCGACACGTCGCCGACACGCGCCAGCTCTGCCTCGGAGCAGGGAAGCAAGGGCCACCCGAGGCGGTCGTCCGTGTCCGTGGGGCGCCGCCTCAGGACGCGCGTCAGCAGCCCGCGGCTGGCGTCCGCCAGGTCGAGGAAGAACAGCAAGCCGACAAGCGCGGGGGCGTCGCCACGGAAGACGAGGCCAGCACCGCCGCCGCCTCTCGCGGAGAGCTTCGCGGTGGTGAAGTCGTCGGCCGACCCCAGGCGGGACTTCCGCGAGTCGATGGAGGAGATGATCGCGGAGAAGGGCATCCGCGGCGCCGCCGACCTGGAGGACCTCCTGGCCTGCTACCTCGCCCTCAACGCCGACGAGCACCACGACCTCATCGTGGAGGTGTTCGAGGAGATCTGGGCCAGCCTCGCCAGCGCTAAACCCATGAAAGGAAACAGAAACGACGGCCGCGAATGAGCTGAGGTCATCGTTCGTCGTCCTCCCCTCTCCCGCTGCACGCCTGCATGCTCGATGATCAGTGCATTCATTTCTAGCAGCGGATTAAACTAGCTTTAGCCTTTTAGTCCCTTGACTTGTTATTGATGGATGATTGCAATAACAAAACTCCGCAAGGGAACTCGAGAAAGGGAAAAAAAAAAGAAAGAAAGACATTCCGGCTCGATCTGCGAAAGTTTTTGGTTCTTTGCTTGCTCGGTGATCGTGTGATTCTTCTCCCTGGGATCGCGTGCGTGGTGCTCGCTGCTTTCTTGAGCGTTCCTAGCGTGATCAGTAGACAGTAGAAGGGTTGTTGTGGTGTGCACTGGACATCGCCACTTACTAATTACAGATTTA
MGRRRFRLADMMPNSWFYKLRDMRRPRGHPPAVGGSGAASAMLQSSAAPPQRGARSATRPGSPRHGSVALPHRTSYYYPT
RDRELPAPEPRGAKDENRQVLPQQLSATGYSRRRHGVARGLEAPAGAHDASRSRRDMYVGVGRDGSDEEDVDEVRRPGVI
APSEYSVSGKVIASETDIVIDLCSEGTAERVLRPIVTRPAMREVVRYEPKDRHVDVADTSPTRASSASEQGSKGHPRRSS
VSVGRRLRTRVSSPRLASARSRKNSKPTSAGASPRKTRPAPPPPLAESFAVVKSSADPRRDFRESMEEMIAEKGIRGAAD
LEDLLACYLALNADEHHDLIVEVFEEIWASLASAKPMKGNRNDGRE
ATGGGGCGCCGTAGGTTCCGGCTCG...
ATGGGGCGCCGTAGGTTCCGGCTCGCCGACATGATGCCCAACTCCTGGTTCTACAAGCTCCGCGACATGCGCCGCCCACGGGGTCACCCTCCTGCCGTTGGCGGCTCCGGGGCCGCGAGCGCAATGCTGCAGTCGTCGGCGGCGCCGCCGCAGAGGGGGGCAAGGTCTGCCACGAGGCCTGGGTCCCCGAGGCACGGGTCCGTGGCGCTCCCGCACAGGACCTCGTACTACTACCCCACCCGGGACCGGGAGCTCCCGGCGCCGGAGCCGAGGGGCGCCAAGGATGAGAACCGGCAGGTCCTCCCCCAGCAGCTGTCGGCGACAGGTTACTCCAGGAGGCGGCACGGGGTTGCGCGCGGGCTGGAGGCTCCGGCCGGAGCGCACGACGCTTCCAGGAGCAGGCGGGACATGTACGTCGGGGTCGGGCGCGACGGCAGCGACGAGGAGGACGTCGACGAGGTCCGGAGGCCGGGGGTGATTGCGCCATCGGAGTATAGCGTGAGCGGTAAGGTGATCGCGTCAGAAACGGACATCGTCATCGACCTCTGCTCCGAGGGCACCGCCGAGCGGGTGCTCCGCCCTATCGTGACGAGGCCCGCGATGAGGGAGGTGGTCCGGTACGAGCCGAAGGACAGGCACGTCGACGTCGCCGACACGTCGCCGACACGCGCCAGCTCTGCCTCGGAGCAGGGAAGCAAGGGCCACCCGAGGCGGTCGTCCGTGTCCGTGGGGCGCCGCCTCAGGACGCGCGTCAGCAGCCCGCGGCTGGCGTCCGCCAGGTCGAGGAAGAACAGCAAGCCGACAAGCGCGGGGGCGTCGCCACGGAAGACGAGGCCAGCACCGCCGCCGCCTCTCGCGGAGAGCTTCGCGGTGGTGAAGTCGTCGGCCGACCCCAGGCGGGACTTCCGCGAGTCGATGGAGGAGATGATCGCGGAGAAGGGCATCCGCGGCGCCGCCGACCTGGAGGACCTCCTGGCCTGCTACCTCGCCCTCAACGCCGACGAGCACCACGACCTCATCGTGGAGGTGTTCGAGGAGATCTGGGCCAGCCTCGCCAGCGCTAAACCCATGAAAGGAAACAGAAACGACGGCCGCGAATGA
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